Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase higb | SAMN04488524_1143 | Not Available | Positive | 1346889 - 1347182 | 11255.6 |
| hth-type transcriptional regulator / antitoxin higa | SAMN04488524_1144 | Not Available | Positive | 1347225 - 1347608 | 14769.8 |
| hypothetical protein | SAMN04488524_1145 | Not Available | Negative | 1347637 - 1348089 | 17374.9 |
| hypothetical protein | SAMN04488524_1146 | Not Available | Negative | 1348284 - 1349384 | 43015.6 |
| hypothetical protein | SAMN04488524_1147 | Not Available | Negative | 1349603 - 1350013 | 15605.4 |
| hypothetical protein | SAMN04488524_1148 | Not Available | Positive | 1350238 - 1350534 | 11784.2 |
| predicted atp-dependent endonuclease of the old family, contains p-loop atpase and toprim domains | SAMN04488524_1149 | Not Available | Positive | 1350838 - 1352709 | 70305.0 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04488524_1150 | Not Available | Positive | 1352714 - 1354300 | 58407.5 |
| hypothetical protein | SAMN04488524_1151 | Not Available | Positive | 1354387 - 1354518 | 4839.3 |
| hypothetical protein | SAMN04488524_1152 | Not Available | Positive | 1354587 - 1355210 | 23508.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

