Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1133 | Not Available | Negative | 1338029 - 1338388 | 13784.3 |
| hypothetical protein | SAMN04488524_1134 | Not Available | Negative | 1338465 - 1339301 | 31738.0 |
| hypothetical protein | SAMN04488524_1135 | Not Available | Negative | 1339355 - 1339621 | 9466.18 |
| hypothetical protein | SAMN04488524_1136 | Not Available | Negative | 1339775 - 1340221 | 16863.4 |
| transcriptional regulator, tetr family | SAMN04488524_1137 | Not Available | Negative | 1340218 - 1341717 | 58134.8 |
| glycine c-acetyltransferase | SAMN04488524_1138 | Not Available | Negative | 1341754 - 1343013 | 46532.8 |
| hypothetical protein | SAMN04488524_1139 | Not Available | Negative | 1343305 - 1343598 | 10962.2 |
| hypothetical protein | SAMN04488524_1140 | Not Available | Negative | 1343808 - 1344047 | 9215.22 |
| helicase conserved c-terminal domain-containing protein | SAMN04488524_1141 | Not Available | Negative | 1344273 - 1345772 | 56849.8 |
| formamidopyrimidine-dna glycosylase | SAMN04488524_1142 | Not Available | Negative | 1345806 - 1346585 | 29148.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

