Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488524_1122 | Not Available | Negative | 1330464 - 1331180 | 27180.1 |
| ghkl domain-containing protein | SAMN04488524_1123 | Not Available | Negative | 1331177 - 1332223 | 39695.1 |
| acyl-coa thioester hydrolase | SAMN04488524_1124 | Not Available | Positive | 1332346 - 1332771 | 16776.2 |
| acyl-coa thioester hydrolase | SAMN04488524_1125 | Not Available | Positive | 1332782 - 1333177 | 15237.4 |
| pas domain s-box-containing protein | SAMN04488524_1127 | Not Available | Negative | 1333396 - 1334733 | 51234.4 |
| methyltransferase domain-containing protein | SAMN04488524_1128 | Not Available | Negative | 1334839 - 1335273 | 15598.0 |
| hypothetical protein | SAMN04488524_1129 | Not Available | Negative | 1335365 - 1336039 | 24666.9 |
| hypothetical protein | SAMN04488524_1130 | Not Available | Negative | 1336142 - 1336735 | 21111.3 |
| hypothetical protein | SAMN04488524_1131 | Not Available | Negative | 1336675 - 1337055 | 14543.6 |
| hypothetical protein | SAMN04488524_1132 | Not Available | Negative | 1337270 - 1337914 | 23447.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

