Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_1112 | Not Available | Positive | 1323474 - 1323815 | 13381.5 |
| hypothetical protein | SAMN04488524_1113 | Not Available | Positive | 1323945 - 1324298 | 13556.3 |
| bon domain-containing protein | SAMN04488524_1114 | Not Available | Positive | 1324418 - 1324915 | 16942.0 |
| sh3 domain-containing protein | SAMN04488524_1115 | Not Available | Positive | 1324933 - 1325355 | 15348.9 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04488524_1116 | Not Available | Negative | 1325404 - 1326861 | 54765.5 |
| ribosomal protein s18 acetylase rimi | SAMN04488524_1117 | Not Available | Positive | 1326950 - 1327396 | 17771.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488524_1118 | Not Available | Negative | 1327409 - 1328140 | 29613.8 |
| mannose-6-phosphate isomerase, type 2 | SAMN04488524_1119 | Not Available | Negative | 1328140 - 1328637 | 19064.3 |
| hypothetical protein | SAMN04488524_1120 | Not Available | Negative | 1328711 - 1329301 | 22735.7 |
| hypothetical protein | SAMN04488524_1121 | Not Available | Positive | 1329530 - 1330444 | 34122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

