Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0078 | Not Available | Negative | 105834 - 107861 | 76591.4 |
| starch-binding associating with outer membrane | SAMN04488524_0079 | Not Available | Negative | 107866 - 109425 | 57581.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0080 | Not Available | Negative | 109437 - 112811 | 125577.0 |
| hypothetical protein | SAMN04488524_0081 | Not Available | Negative | 112783 - 112935 | 5593.66 |
| fecr family protein | SAMN04488524_0082 | Not Available | Negative | 113014 - 114150 | 41475.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0083 | Not Available | Negative | 114228 - 114806 | 22538.8 |
| alpha-glucosidase | SAMN04488524_0084 | Not Available | Negative | 114928 - 116808 | 69905.8 |
| starch-binding associating with outer membrane | SAMN04488524_0085 | Not Available | Negative | 116821 - 118287 | 54433.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0086 | Not Available | Negative | 118299 - 121748 | 128063.0 |
| fecr family protein | SAMN04488524_0087 | Not Available | Negative | 121927 - 123069 | 41823.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

