Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488524_1082 | Not Available | Negative | 1284664 - 1285254 | 22652.7 |
| hypothetical protein | SAMN04488524_1083 | Not Available | Negative | 1285621 - 1286319 | 25376.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_1084 | Not Available | Negative | 1286772 - 1288190 | 53121.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488524_1085 | Not Available | Negative | 1288331 - 1290268 | 71727.1 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488524_1086 | Not Available | Negative | 1290315 - 1290929 | 22783.1 |
| hypothetical protein | SAMN04488524_1087 | Not Available | Negative | 1290929 - 1291867 | 34445.5 |
| phage shock protein c (pspc) family protein | SAMN04488524_1088 | Not Available | Negative | 1291870 - 1292628 | 28017.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488524_1089 | Not Available | Negative | 1292650 - 1293339 | 25150.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488524_1090 | Not Available | Positive | 1293509 - 1294243 | 26144.8 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488524_1091 | Not Available | Positive | 1294240 - 1294992 | 28258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

