Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | SAMN04488524_1051 | Not Available | Positive | 1256827 - 1257885 | 38338.0 |
| l-threonine ammonia-lyase | SAMN04488524_1052 | Not Available | Positive | 1257960 - 1259204 | 45509.2 |
| tetratricopeptide repeat-containing protein | SAMN04488524_1053 | Not Available | Negative | 1259211 - 1261484 | 87102.9 |
| hypothetical protein | SAMN04488524_1054 | Not Available | Positive | 1261685 - 1261951 | 10087.6 |
| hypothetical protein | SAMN04488524_1055 | Not Available | Positive | 1261957 - 1262271 | 11618.0 |
| hypothetical protein | SAMN04488524_1056 | Not Available | Positive | 1262310 - 1263038 | 27001.4 |
| hypothetical protein | SAMN04488524_1057 | Not Available | Positive | 1263122 - 1263532 | 15176.2 |
| hypothetical protein | SAMN04488524_1058 | Not Available | Negative | 1263579 - 1264286 | 27789.5 |
| hypothetical protein | SAMN04488524_1059 | Not Available | Positive | 1264593 - 1264748 | 5647.39 |
| regulator of nucleoside diphosphate kinase | SAMN04488524_1060 | Not Available | Positive | 1264755 - 1265150 | 14437.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

