Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacid dehydratase | SAMN04488524_1041 | Not Available | Positive | 1244443 - 1246140 | 59659.8 |
| acetolactate synthase, large subunit | SAMN04488524_1042 | Not Available | Positive | 1246178 - 1247917 | 63336.3 |
| acetolactate synthase, small subunit | SAMN04488524_1043 | Not Available | Positive | 1247926 - 1248540 | 24064.8 |
| dinb superfamily protein | SAMN04488524_1044 | Not Available | Positive | 1248550 - 1249014 | 17573.0 |
| ketol-acid reductoisomerase | SAMN04488524_1045 | Not Available | Positive | 1249051 - 1250532 | 54132.1 |
| molybdate transport system atp-binding protein | SAMN04488524_1046 | Not Available | Positive | 1250539 - 1252014 | 55184.2 |
| 2-isopropylmalate synthase | SAMN04488524_1047 | Not Available | Positive | 1252027 - 1253190 | 42559.8 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04488524_1048 | Not Available | Positive | 1253229 - 1254653 | 51064.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04488524_1049 | Not Available | Positive | 1254671 - 1255267 | 22410.5 |
| d-citramalate synthase | SAMN04488524_1050 | Not Available | Positive | 1255286 - 1256803 | 56084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

