Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1030 | Not Available | Negative | 1232978 - 1236574 | 131201.0 |
| fecr family protein | SAMN04488524_1031 | Not Available | Negative | 1236770 - 1237909 | 41225.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1032 | Not Available | Negative | 1237971 - 1238546 | 22645.4 |
| hypothetical protein | SAMN04488524_1034 | Not Available | Negative | 1238930 - 1239154 | 8618.59 |
| Trna-arg | Not Available | Not Available | Positive | 1239418 - 1239491 | Not Available |
| peroxiredoxin | SAMN04488524_1036 | Not Available | Negative | 1239600 - 1240064 | 17157.4 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488524_1037 | Not Available | Negative | 1240085 - 1240990 | 33163.1 |
| atp synthase f1 subcomplex beta subunit | SAMN04488524_1038 | Not Available | Positive | 1241210 - 1242715 | 54198.0 |
| atp synthase f1 subcomplex epsilon subunit | SAMN04488524_1039 | Not Available | Positive | 1242740 - 1242982 | 8492.53 |
| branched-chain amino acid aminotransferase | SAMN04488524_1040 | Not Available | Positive | 1243502 - 1244392 | 33537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

