Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488524_1020 | Not Available | Negative | 1217715 - 1218917 | 43618.6 |
| sugar phosphate isomerase/epimerase | SAMN04488524_1021 | Not Available | Negative | 1218935 - 1219804 | 32013.4 |
| predicted dehydrogenase | SAMN04488524_1022 | Not Available | Negative | 1219836 - 1221182 | 50294.8 |
| starch-binding associating with outer membrane | SAMN04488524_1023 | Not Available | Negative | 1221208 - 1222857 | 60925.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_1024 | Not Available | Negative | 1222869 - 1226270 | 123676.0 |
| fecr family protein | SAMN04488524_1025 | Not Available | Negative | 1226409 - 1227551 | 42527.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_1026 | Not Available | Positive | 1227808 - 1228398 | 22730.3 |
| peroxiredoxin | SAMN04488524_1027 | Not Available | Negative | 1228424 - 1230145 | 64203.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1028 | Not Available | Negative | 1230142 - 1231413 | 47992.5 |
| susd family protein | SAMN04488524_1029 | Not Available | Negative | 1231475 - 1232953 | 55828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

