Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0999 | Not Available | Positive | 1192139 - 1195477 | 125101.0 |
| susd family protein | SAMN04488524_1000 | Not Available | Positive | 1195495 - 1196967 | 55644.1 |
| protein of unknown function | SAMN04488524_1001 | Not Available | Positive | 1196980 - 1197825 | 31672.6 |
| pkd-like family protein | SAMN04488524_1002 | Not Available | Positive | 1197850 - 1199394 | 57492.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_1003 | Not Available | Positive | 1199420 - 1200538 | 41618.1 |
| hypothetical protein | SAMN04488524_1004 | Not Available | Negative | 1200624 - 1200914 | 10907.0 |
| hypothetical protein | SAMN04488524_1005 | Not Available | Negative | 1200991 - 1201194 | 7125.42 |
| hypothetical protein | SAMN04488524_1006 | Not Available | Positive | 1201436 - 1201642 | 7501.91 |
| uncharacterized membrane protein | SAMN04488524_1008 | Not Available | Positive | 1202000 - 1202518 | 18873.5 |
| hypothetical protein | SAMN04488524_1009 | Not Available | Negative | 1202581 - 1202916 | 13103.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

