Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | SAMN04488524_0068 | Not Available | Negative | 85307 - 86488 | 44411.8 |
| alpha-d-xyloside xylohydrolase | SAMN04488524_0069 | Not Available | Negative | 86497 - 88656 | 80582.2 |
| alpha-l-fucosidase 2 | SAMN04488524_0070 | Not Available | Negative | 88659 - 91262 | 96024.1 |
| alpha-l-fucosidase 2 | SAMN04488524_0071 | Not Available | Negative | 91264 - 93738 | 91626.1 |
| beta-galactosidase | SAMN04488524_0072 | Not Available | Negative | 93743 - 96205 | 93178.0 |
| arac-type dna-binding protein | SAMN04488524_0073 | Not Available | Negative | 96381 - 97259 | 33531.5 |
| alpha-l-fucosidase | SAMN04488524_0074 | Not Available | Negative | 97499 - 99298 | 67901.6 |
| hypothetical protein | SAMN04488524_0075 | Not Available | Negative | 99351 - 100910 | 55748.3 |
| hypothetical protein | SAMN04488524_0076 | Not Available | Negative | 100984 - 103290 | 86240.6 |
| hypothetical protein | SAMN04488524_0077 | Not Available | Negative | 103294 - 105837 | 95055.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

