Mycobacterium abscessus subsp. abscessus strain 642

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacteroides

Description

Mycobacterium abscessus subsp. abscessus strain 642 is a rod-shaped bacterium that thrives in chloraminated water, suggesting its adaptation to environments where water sanitation is practiced. This strain possesses true flagella, enabling motility, which may facilitate its survival and colonization in various hosts. The strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and virulence. M. abscessus subsp. abscessus has a broad host range, infecting Homo sapiens, Metazoa, Aves, Phocidae, Rodentia, and even Panthera leo. This diversity highlights its potential as a zoonotic pathogen, capable of crossing species barriers and affecting various animals, including humans. The health effects associated with this strain are significant, as it can cause a range of infections, including endocarditis, peritonitis, and various pulmonary diseases. Specific manifestations include lung infections, cervical lymphadenitis, and chronic pulmonary infections, often leading to severe conditions such as non-cavitary pneumonia and disseminated infections. The strain is also linked to peritoneal dialysis-associated peritonitis, underscoring its relevance in clinical settings. The ecological insight gained from studying M. abscessus subsp. abscessus strain 642 is its ability to thrive in chloraminated water and its capacity to infect multiple hosts. This adaptability may enhance its persistence in both natural and anthropogenic environments, posing challenges for public health and the management of mycobacterial diseases.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacteroides
SpeciesMycobacteroides abscessus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchloraminated water
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium abscessus subsp. abscessus strain 642


Gene Summary

Adenine Count

1266218 bp

Thymine Count

1266038 bp

Guanine Count

2251655 bp

Cytosine Count

2257149 bp

Genome Length

7042971 bp

Protein-coding Genes

8180 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
IntegraseSAMEA1967818_00259Not AvailablePositive229694 - 23126258334.9
uncharacterised proteinSAMEA1967818_00260Not AvailableNegative231312 - 23159310401.3
Head to tail connectorSAMEA1967818_00261Not AvailableNegative231604 - 23202615627.4
uncharacterised proteinSAMEA1967818_00262Not AvailableNegative232070 - 2322918388.05
Terminase small subunitSAMEA1967818_00263Not AvailableNegative232278 - 23257711104.2
TapemeasureSAMEA1967818_00264Not AvailableNegative233439 - 23543970021.2
phage capsid proteinSAMEA1967818_00265Not AvailableNegative235518 - 23634829320.6
uncharacterised proteinSAMEA1967818_00266Not AvailableNegative236463 - 23690315629.9
uncharacterised proteinSAMEA1967818_00267Not AvailableNegative236896 - 23716210183.9
Dna primaseSAMEA1967818_00268Not AvailableNegative237422 - 23865446185.9

Displaying genes 1 – 10 of 8261 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Macrophage necrosisCausesPMC11064574
Ntm-pdCausesPMC11100324
Lung diseasesCausesPMC11716203
Chronic pulmonary and disseminated infectionsCausesPMC12871676
Chronic pulmonary infectionsCausesPMC12871676
Disseminated infectionsCausesPMC12871676
Non-cavitary pneumoniaCausesPMC13221995
Mycobacterial diseasesCausesPMC5276850
Pulmonary infectionsCausesPMC6395927
EndocarditisCausesPMC7642850

Displaying health effects 1 – 10 of 24 in total