Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable shikimate-5-dehydrogenase (aroe) | SAMEA1967818_00463 | Not Available | Positive | 390954 - 391769 | 27494.9 |
| probable shikimate-5-dehydrogenase (aroe) | SAMEA1967818_00464 | Not Available | Positive | 392037 - 392780 | 24977.8 |
| p-aminobenzoate n-oxygenase aurf | SAMEA1967818_00465 | Not Available | Positive | 392975 - 393988 | 39157.2 |
| probable transcriptional regulator, tetr family | SAMEA1967818_00466 | Not Available | Negative | 393971 - 394690 | 26701.5 |
| probable trans-aconitate methyltransferase | SAMEA1967818_00467 | Not Available | Negative | 394700 - 395248 | 19850.3 |
| probable trans-aconitate methyltransferase | SAMEA1967818_00468 | Not Available | Negative | 395664 - 396461 | 28965.1 |
| conserved membrane protein of uncharacterised function | SAMEA1967818_00469 | Not Available | Positive | 396499 - 396939 | 14744.5 |
| chorismate synthase | SAMEA1967818_00470 | Not Available | Positive | 396997 - 398244 | 43243.4 |
| shikimate kinase (arok) | SAMEA1967818_00471 | Not Available | Positive | 398241 - 398891 | 23195.6 |
| 3-dehydroquinate synthase arob | SAMEA1967818_00472 | Not Available | Positive | 398884 - 400002 | 38999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
