Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | SAMEA1967818_00402 | Not Available | Negative | 343242 - 344240 | 36925.0 |
| putative 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA1967818_00403 | Not Available | Negative | 344252 - 344539 | 9635.62 |
| cysteinyl-trna synthetase | SAMEA1967818_00404 | Not Available | Negative | 344485 - 345099 | 22333.5 |
| putative 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA1967818_00405 | Not Available | Negative | 345111 - 345587 | 15943.0 |
| putative 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMEA1967818_00406 | Not Available | Negative | 345584 - 346216 | 21539.8 |
| transcription factor | SAMEA1967818_00407 | Not Available | Negative | 346251 - 346739 | 17918.5 |
| uncharacterised protein | SAMEA1967818_00408 | Not Available | Negative | 347295 - 347567 | 9051.84 |
| mfs-type transporter | SAMEA1967818_00409 | Not Available | Positive | 348185 - 349447 | 42848.4 |
| protein of uncharacterised function (duf664) | SAMEA1967818_00410 | Not Available | Positive | 349502 - 350035 | 19358.6 |
| putative aldehyde dehydrogenase | SAMEA1967818_00411 | Not Available | Positive | 350078 - 351607 | 55068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
