Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcription repressor hrca | SAMEA1967818_03083 | Not Available | Positive | 2722180 - 2722470 | 10501.4 |
| transcription regulator of the arc/metj class | SAMEA1967818_03084 | Not Available | Negative | 2722478 - 2722786 | 11827.3 |
| heat-inducible transcription repressor hrca | SAMEA1967818_03085 | Not Available | Positive | 2722898 - 2723923 | 36503.9 |
| uncharacterised protein | SAMEA1967818_03086 | Not Available | Negative | 2723920 - 2724231 | 10907.2 |
| uncharacterised protein | SAMEA1967818_03087 | Not Available | Negative | 2724295 - 2724534 | 8622.16 |
| uncharacterised protein | SAMEA1967818_03088 | Not Available | Positive | 2724630 - 2724881 | 8558.25 |
| uncharacterised protein | SAMEA1967818_03089 | Not Available | Positive | 2724896 - 2725468 | 20730.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMEA1967818_03090 | Not Available | Negative | 2725543 - 2727027 | 50108.8 |
| udp-n-acetylmuramyl-tripeptide synthetase mure | SAMEA1967818_03091 | Not Available | Negative | 2727020 - 2728567 | 53333.0 |
| probable penicillin-binding membrane protein pbpb | SAMEA1967818_03092 | Not Available | Negative | 2728699 - 2729826 | 39908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
