Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinuclear metal center protein, ybgi/sa1388 family | SAMEA1967818_03033 | Not Available | Negative | 2680847 - 2681986 | 39540.7 |
| putative aminotransferase cobc | SAMEA1967818_03034 | Not Available | Negative | 2681986 - 2683005 | 36568.6 |
| 5'-nucleotidase | SAMEA1967818_03035 | Not Available | Positive | 2683040 - 2683690 | 22827.0 |
| putative low molecular weight protein tyrosine phosphatase | SAMEA1967818_03036 | Not Available | Positive | 2683683 - 2684171 | 17926.2 |
| surf1-like protein | SAMEA1967818_03037 | Not Available | Positive | 2684171 - 2684986 | 29842.1 |
| probable cobalamin biosynthesis protein cobd | SAMEA1967818_03038 | Not Available | Negative | 2684971 - 2685225 | 8798.69 |
| polyketide synthase pks13 | SAMEA1967818_03039 | Not Available | Positive | 2685229 - 2685813 | 21329.2 |
| propionyl-coa carboxylase, beta subunit (pccb) | SAMEA1967818_03040 | Not Available | Positive | 2685829 - 2687382 | 56388.3 |
| uncharacterised protein | SAMEA1967818_03041 | Not Available | Negative | 2687446 - 2687859 | 14775.1 |
| putative cation transporter | SAMEA1967818_03042 | Not Available | Negative | 2687898 - 2688119 | 7789.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
