Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative carboxymuconolactone decarboxylase | SAMEA1967818_02811 | Not Available | Positive | 2476255 - 2476800 | 20139.8 |
| putative cyclase | SAMEA1967818_02812 | Not Available | Positive | 2476800 - 2477498 | 25494.9 |
| putative cyclase | SAMEA1967818_02813 | Not Available | Positive | 2477470 - 2477706 | 8269.01 |
| putative transcriptional regulator, tetr family | SAMEA1967818_02814 | Not Available | Negative | 2477721 - 2478329 | 21899.3 |
| hypothetical dipeptidyl aminopeptidase/ acylaminoacyl-peptidase related protein | SAMEA1967818_02815 | Not Available | Positive | 2478417 - 2479268 | 31206.5 |
| uncharacterised protein | SAMEA1967818_02816 | Not Available | Positive | 2480284 - 2480934 | 23192.7 |
| atpase with chaperone activity, atp-binding subunit | SAMEA1967818_02817 | Not Available | Negative | 2481104 - 2482993 | 69457.2 |
| protein lsr2 precursor | SAMEA1967818_02818 | Not Available | Negative | 2483274 - 2483693 | 15475.0 |
| lysyl-trna synthetase (lyss) | SAMEA1967818_02819 | Not Available | Negative | 2483781 - 2485283 | 55892.6 |
| type iii pantothenate kinase | SAMEA1967818_02820 | Not Available | Negative | 2485348 - 2486088 | 26312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
