Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase/phenazine biosynthesis protein phzd | SAMEA1967818_02641 | Not Available | Positive | 2321052 - 2321780 | 26244.1 |
| putative alkylhydroperoxidase ahpd | SAMEA1967818_02642 | Not Available | Negative | 2321842 - 2322369 | 18705.6 |
| putative alkylhydroperoxidase c | SAMEA1967818_02643 | Not Available | Negative | 2322385 - 2322972 | 21558.2 |
| probable hydrogen peroxide-inducible genes activator | SAMEA1967818_02644 | Not Available | Positive | 2323069 - 2324007 | 32979.0 |
| pep phosphonomutase and related enzymes | SAMEA1967818_02645 | Not Available | Negative | 2324004 - 2324321 | 11504.8 |
| uncharacterised protein | SAMEA1967818_02646 | Not Available | Negative | 2324914 - 2325156 | 8489.25 |
| nad(p)h nitroreductase acg | SAMEA1967818_02647 | Not Available | Positive | 2325258 - 2326250 | 36241.6 |
| universal stress protein | SAMEA1967818_02648 | Not Available | Positive | 2326260 - 2327117 | 30789.2 |
| uncharacterised protein | SAMEA1967818_02649 | Not Available | Positive | 2327234 - 2327542 | 10746.7 |
| uncharacterised protein | SAMEA1967818_02650 | Not Available | Negative | 2327546 - 2327752 | 7214.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
