Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable formate dehydrogenase, a chain | SAMEA1967818_02621 | Not Available | Negative | 2301136 - 2303067 | 70054.5 |
| probable formate dehydrogenase, a chain | SAMEA1967818_02622 | Not Available | Negative | 2303048 - 2304811 | 63297.7 |
| probable atp-binding protein abc transporter cydd | SAMEA1967818_02623 | Not Available | Positive | 2305285 - 2305704 | 14624.6 |
| probable atp-binding protein abc transporter cydc | SAMEA1967818_02624 | Not Available | Positive | 2305688 - 2309500 | 130890.0 |
| abc transporter atp-binding protein | SAMEA1967818_02625 | Not Available | Positive | 2309626 - 2310192 | 19670.8 |
| uncharacterised protein | SAMEA1967818_02626 | Not Available | Positive | 2310189 - 2310671 | 16429.3 |
| uncharacterised protein | SAMEA1967818_02627 | Not Available | Negative | 2310675 - 2311025 | 12341.6 |
| uncharacterised protein | SAMEA1967818_02628 | Not Available | Positive | 2311091 - 2311429 | 11633.5 |
| uncharacterised protein | SAMEA1967818_02629 | Not Available | Negative | 2311433 - 2311579 | 5134.07 |
| protein of uncharacterised function (duf3499) | SAMEA1967818_02630 | Not Available | Negative | 2312518 - 2312883 | 12739.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
