Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable na+/h+ antiporter nhaa | SAMEA1967818_02401 | Not Available | Negative | 2109593 - 2109748 | 5467.52 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMEA1967818_02402 | Not Available | Negative | 2109690 - 2110601 | 32367.8 |
| probable na+/h+ antiporter nhaa | SAMEA1967818_02403 | Not Available | Negative | 2110623 - 2111948 | 46247.7 |
| rna methyltransferase | SAMEA1967818_02404 | Not Available | Negative | 2112048 - 2113214 | 41780.7 |
| amino acid permease | SAMEA1967818_02405 | Not Available | Negative | 2113215 - 2114486 | 46821.6 |
| amino acid permease | SAMEA1967818_02406 | Not Available | Negative | 2114487 - 2115563 | 40922.1 |
| hsdr family type i site-specific deoxyribonuclease | SAMEA1967818_02407 | Not Available | Positive | 2115667 - 2116605 | 34759.3 |
| metal-dependent hydrolase | SAMEA1967818_02408 | Not Available | Positive | 2116592 - 2117314 | 28559.3 |
| uncharacterised protein | SAMEA1967818_02409 | Not Available | Positive | 2117686 - 2119143 | 51417.8 |
| type iv secretory pathway, virb4 components | SAMEA1967818_02410 | Not Available | Positive | 2119155 - 2121209 | 73256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
