Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266218 bp
Thymine Count
1266038 bp
Guanine Count
2251655 bp
Cytosine Count
2257149 bp
Genome Length
7042971 bp
Protein-coding Genes
8180 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease, beta subunit (ureb) | SAMEA1967818_01588 | Not Available | Positive | 1404080 - 1404412 | 11779.9 |
| urease, alpha subunit (urec) | SAMEA1967818_01589 | Not Available | Positive | 1404409 - 1407069 | 93196.8 |
| urease accessory protein (uref) | SAMEA1967818_01590 | Not Available | Positive | 1407069 - 1407713 | 22399.8 |
| urease accessory protein (ureg) | SAMEA1967818_01591 | Not Available | Positive | 1407735 - 1408427 | 24529.2 |
| putative urease accessory protein (ureh?) | SAMEA1967818_01592 | Not Available | Positive | 1408417 - 1409064 | 22644.1 |
| probable nadh dehydrogenase (ndh) | SAMEA1967818_01593 | Not Available | Negative | 1409075 - 1410529 | 52007.5 |
| probable nadh dehydrogenase (ndh) | SAMEA1967818_01594 | Not Available | Negative | 1410681 - 1411343 | 23174.6 |
| tigr03086 family protein | SAMEA1967818_01595 | Not Available | Negative | 1411585 - 1412064 | 17077.4 |
| uncharacterised protein | SAMEA1967818_01596 | Not Available | Positive | 1412305 - 1412733 | 15354.9 |
| uncharacterised protein | SAMEA1967818_01597 | Not Available | Positive | 1412923 - 1413096 | 5909.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
