Fibrobacter sp. UWB7

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWB7 is a Gram-negative, rod-shaped bacterium that exhibits the presence of flagella, indicating its motility. This organism has a single replicon, which is characteristic of many prokaryotic cells and indicates a streamlined genome structure. The accession number for Fibrobacter sp. UWB7 is FRCO00000000.1, which allows for its identification and retrieval of genetic information in various biological databases. As a member of the Fibrobacter genus, this bacterium is likely involved in the degradation of complex carbohydrates, particularly cellulose, which is a significant component of plant biomass. This trait is particularly relevant in ecological contexts, as Fibrobacter species contribute to the breakdown of lignocellulosic materials in various environments, such as soil and the gastrointestinal tracts of herbivorous animals. Their ability to degrade cellulose plays a crucial role in carbon cycling and nutrient dynamics within ecosystems. Understanding the characteristics of Fibrobacter sp. UWB7 can provide insights into its ecological roles, especially in relation to biomass decomposition and its potential applications in biotechnology for biofuel production or waste management.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWB7
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWB7
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWB7 genome assembly, contig: Ga0136279_112, whole

Gene Summary

Adenine Count

1020558 bp

Thymine Count

966754 bp

Guanine Count

888000 bp

Cytosine Count

936945 bp

Genome Length

3812257 bp

Protein-coding Genes

3087 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05720467_0218Not AvailableNegative262860 - 266825150545.0
short-chain dehydrogenaseSAMN05720467_0219Not AvailableNegative267105 - 26784226423.0
helix-turn-helixSAMN05720467_0220Not AvailablePositive268149 - 26851413953.8
23s rrna m(2)a-2503 methyltransferaseSAMN05720467_0221Not AvailablePositive268555 - 26962840523.9
thiopurine s-methyltransferase (tpmt)SAMN05720467_0222Not AvailablePositive269622 - 27024223496.2
sec-c motif-containing proteinSAMN05720467_0223Not AvailablePositive270432 - 27092918679.0
n-acetyl-gamma-glutamyl-phosphate reductaseSAMN05720467_0224Not AvailablePositive271049 - 27201434722.0
transketolaseSAMN05720467_0225Not AvailableNegative272163 - 27423874552.8
npcbm/new2 domain-containing proteinSAMN05720467_0226Not AvailablePositive274433 - 27699497009.9
dolichol-phosphate mannosyltransferaseSAMN05720467_0227Not AvailablePositive277160 - 27807134397.0

Displaying genes 221 – 230 of 2681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.