Flavobacterium pectinovorum strain DSM 6368

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium pectinovorum strain DSM 6368 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is motile, possessing true flagella that facilitate its movement. Genetically, it contains a single replicon, indicating a streamlined genomic architecture. The strain is cataloged under the accession number FRBX00000000.1. The aerobic nature of Flavobacterium pectinovorum suggests that it thrives in oxygen-rich environments, which is typical for many members of the Flavobacterium genus. These bacteria are often associated with the decomposition of organic matter, playing a significant role in nutrient cycling within various ecosystems. Their ability to degrade pectin, a polysaccharide found in plant cell walls, positions them as important contributors to the breakdown of plant materials in soil and aquatic environments. The motility provided by flagella may enhance the strain's ability to locate and colonize suitable niches where organic materials are abundant, thereby influencing microbial community dynamics. Through these interactions, Flavobacterium pectinovorum strain DSM 6368 may significantly affect the ecological balance in its habitat, supporting the growth of other microorganisms and contributing to soil health or aquatic ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium pectinovorum
Strainstrain DSM 6368

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium pectinovorum strain DSM 6368
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium pectinovorum strain DSM 6368 genome assembly,

Gene Summary

Adenine Count

1882930 bp

Thymine Count

1844919 bp

Guanine Count

973747 bp

Cytosine Count

908918 bp

Genome Length

5610979 bp

Protein-coding Genes

4642 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s18pSAMN05444387_0698Not AvailablePositive814574 - 81487011355.1
lsu ribosomal protein l9pSAMN05444387_0699Not AvailablePositive814936 - 81537615914.4
carboxypeptidase regulatory-like domain-containing proteinSAMN05444387_0700Not AvailablePositive815477 - 818647115575.0
hypothetical proteinSAMN05444387_0701Not AvailablePositive818762 - 81923518233.6
gliding motility-associated c-terminal domain-containing proteinSAMN05444387_0702Not AvailablePositive820887 - 832250390830.0
type ix secretion system membrane protein, porp/sprf familySAMN05444387_0703Not AvailablePositive832296 - 83322834981.5
outer membrane protein ompaSAMN05444387_0704Not AvailablePositive833240 - 83517772740.6
dna ligase (nad+)SAMN05444387_0705Not AvailablePositive835437 - 83744375610.7
yhhn-like proteinSAMN05444387_0706Not AvailablePositive837430 - 83812527247.6
5'-nucleotidaseSAMN05444387_0707Not AvailableNegative838111 - 83908836539.9

Displaying genes 691 – 700 of 4699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.