Flavobacterium xanthum strain DSM 3661

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium xanthum strain DSM 3661 is characterized as a rod-shaped bacterium, which is a common morphology among members of the Flavobacterium genus. This strain possesses a single flagellum, indicating its capability for motility, which can be crucial for its ecological interactions and survival in various environments. The strain is notable for having one replicon, which suggests a relatively straightforward genetic organization. The genome of Flavobacterium xanthum strain DSM 3661 is cataloged under the accession number FRBU00000000.1, providing a reference point for genetic and comparative studies within the Flavobacterium genus. Ecologically, members of the Flavobacterium genus are often associated with aquatic environments, where they play important roles in the degradation of organic matter. The motility conferred by the presence of a flagellum may enhance the strain's ability to navigate through its environment, facilitating access to nutrient sources. Understanding the traits of Flavobacterium xanthum strain DSM 3661 can provide insights into its ecological role and potential applications in bioremediation or biotechnology, particularly in the context of organic matter decomposition in aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium xanthum
Strainstrain DSM 3661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium xanthum strain DSM 3661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium xanthum strain DSM 3661 genome assembly, contig:

Gene Summary

Adenine Count

1232718 bp

Thymine Count

1230183 bp

Guanine Count

645366 bp

Cytosine Count

647315 bp

Genome Length

3755582 bp

Protein-coding Genes

3279 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gh3 auxin-responsive promoterSAMN05443669_100511Not AvailableNegative696947 - 69847058757.0
protein of unknown functionSAMN05443669_100512Not AvailablePositive698607 - 69940130426.6
asma-like c-terminal regionSAMN05443669_100514Not AvailableNegative699646 - 70226495231.1
protease-4SAMN05443669_100515Not AvailableNegative702459 - 70421964684.7
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinaseSAMN05443669_100516Not AvailablePositive704358 - 70549444344.4
gliding motility-associated c-terminal domain-containing proteinSAMN05443669_100517Not AvailableNegative705501 - 709475142647.0
spou rrna methylase family proteinSAMN05443669_100518Not AvailableNegative709514 - 71005020036.2
protein of unknown functionSAMN05443669_100519Not AvailableNegative710124 - 71057315444.6
dna mismatch repair protein mutsSAMN05443669_100520Not AvailablePositive710773 - 71334096555.0
Trna-glyNot AvailableNot AvailablePositive713488 - 713563Not Available

Displaying genes 641 – 650 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.