Flavobacterium xanthum strain DSM 3661

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium xanthum strain DSM 3661 is characterized as a rod-shaped bacterium, which is a common morphology among members of the Flavobacterium genus. This strain possesses a single flagellum, indicating its capability for motility, which can be crucial for its ecological interactions and survival in various environments. The strain is notable for having one replicon, which suggests a relatively straightforward genetic organization. The genome of Flavobacterium xanthum strain DSM 3661 is cataloged under the accession number FRBU00000000.1, providing a reference point for genetic and comparative studies within the Flavobacterium genus. Ecologically, members of the Flavobacterium genus are often associated with aquatic environments, where they play important roles in the degradation of organic matter. The motility conferred by the presence of a flagellum may enhance the strain's ability to navigate through its environment, facilitating access to nutrient sources. Understanding the traits of Flavobacterium xanthum strain DSM 3661 can provide insights into its ecological role and potential applications in bioremediation or biotechnology, particularly in the context of organic matter decomposition in aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium xanthum
Strainstrain DSM 3661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium xanthum strain DSM 3661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium xanthum strain DSM 3661 genome assembly, contig:

Gene Summary

Adenine Count

1232718 bp

Thymine Count

1230183 bp

Guanine Count

645366 bp

Cytosine Count

647315 bp

Genome Length

3755582 bp

Protein-coding Genes

3279 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
negative transcriptional regulator, paib familySAMN05443669_100137Not AvailableNegative41729 - 4234323559.9
udp-n-acetylmuramate dehydrogenaseSAMN05443669_100138Not AvailableNegative42415 - 4342837885.4
asparagine synthase (glutamine-hydrolysing)SAMN05443669_100139Not AvailableNegative43477 - 4532471330.4
protein involved in gliding motility remcSAMN05443669_100140Not AvailableNegative45327 - 4639440403.7
tigr02453 family proteinSAMN05443669_100141Not AvailableNegative46400 - 4707126154.3
thioredoxinSAMN05443669_100142Not AvailableNegative47078 - 4777626377.1
dna replication and repair protein recfSAMN05443669_100143Not AvailableNegative47854 - 4893341662.9
tetratricopeptide repeat-containing proteinSAMN05443669_100144Not AvailablePositive49165 - 4994127936.8
6,7-dimethyl-8-ribityllumazine synthaseSAMN05443669_100145Not AvailablePositive50047 - 5062220969.1
dna mismatch repair protein mutlSAMN05443669_100146Not AvailablePositive50810 - 5265168633.8

Displaying genes 41 – 50 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.