Flavobacterium xanthum strain DSM 3661

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium xanthum strain DSM 3661 is characterized as a rod-shaped bacterium, which is a common morphology among members of the Flavobacterium genus. This strain possesses a single flagellum, indicating its capability for motility, which can be crucial for its ecological interactions and survival in various environments. The strain is notable for having one replicon, which suggests a relatively straightforward genetic organization. The genome of Flavobacterium xanthum strain DSM 3661 is cataloged under the accession number FRBU00000000.1, providing a reference point for genetic and comparative studies within the Flavobacterium genus. Ecologically, members of the Flavobacterium genus are often associated with aquatic environments, where they play important roles in the degradation of organic matter. The motility conferred by the presence of a flagellum may enhance the strain's ability to navigate through its environment, facilitating access to nutrient sources. Understanding the traits of Flavobacterium xanthum strain DSM 3661 can provide insights into its ecological role and potential applications in bioremediation or biotechnology, particularly in the context of organic matter decomposition in aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium xanthum
Strainstrain DSM 3661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium xanthum strain DSM 3661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium xanthum strain DSM 3661 genome assembly, contig:

Gene Summary

Adenine Count

1232718 bp

Thymine Count

1230183 bp

Guanine Count

645366 bp

Cytosine Count

647315 bp

Genome Length

3755582 bp

Protein-coding Genes

3279 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
starch-binding associating with outer membraneSAMN05443669_100376Not AvailablePositive474353 - 47590056006.3
23s rrna (guanosine2251-2'-o)-methyltransferaseSAMN05443669_100377Not AvailablePositive476150 - 47688426382.1
membrane associated serine protease, rhomboid familySAMN05443669_100378Not AvailableNegative476944 - 47772029725.8
putative atpaseSAMN05443669_100380Not AvailablePositive478019 - 47929647425.0
hypothetical proteinSAMN05443669_100381Not AvailableNegative479367 - 48011328111.7
putative hydrolase of the had superfamilySAMN05443669_100382Not AvailableNegative480117 - 48080626838.7
dna repair protein radcSAMN05443669_100383Not AvailableNegative480816 - 48151125409.9
acetyltransferase (gnat) family proteinSAMN05443669_100384Not AvailableNegative481524 - 48198217561.4
udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligaseSAMN05443669_100385Not AvailableNegative481990 - 48334550578.2
tetratricopeptide repeat-containing proteinSAMN05443669_100386Not AvailableNegative483389 - 48408726719.3

Displaying genes 451 – 460 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.