Flavobacterium xanthum strain DSM 3661

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium xanthum strain DSM 3661 is characterized as a rod-shaped bacterium, which is a common morphology among members of the Flavobacterium genus. This strain possesses a single flagellum, indicating its capability for motility, which can be crucial for its ecological interactions and survival in various environments. The strain is notable for having one replicon, which suggests a relatively straightforward genetic organization. The genome of Flavobacterium xanthum strain DSM 3661 is cataloged under the accession number FRBU00000000.1, providing a reference point for genetic and comparative studies within the Flavobacterium genus. Ecologically, members of the Flavobacterium genus are often associated with aquatic environments, where they play important roles in the degradation of organic matter. The motility conferred by the presence of a flagellum may enhance the strain's ability to navigate through its environment, facilitating access to nutrient sources. Understanding the traits of Flavobacterium xanthum strain DSM 3661 can provide insights into its ecological role and potential applications in bioremediation or biotechnology, particularly in the context of organic matter decomposition in aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium xanthum
Strainstrain DSM 3661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium xanthum strain DSM 3661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium xanthum strain DSM 3661 genome assembly, contig:

Gene Summary

Adenine Count

1232718 bp

Thymine Count

1230183 bp

Guanine Count

645366 bp

Cytosine Count

647315 bp

Genome Length

3755582 bp

Protein-coding Genes

3279 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal transduction histidine kinaseSAMN05443669_100128Not AvailableNegative30206 - 3237181602.5
glyceraldehyde 3-phosphate dehydrogenaseSAMN05443669_100129Not AvailableNegative32387 - 3339436720.4
lipoic acid synthetaseSAMN05443669_100130Not AvailableNegative33459 - 3432832906.0
protein tonbSAMN05443669_100132Not AvailableNegative34609 - 3542429759.7
carboxypeptidase regulatory-like domain-containing proteinSAMN05443669_100133Not AvailableNegative35679 - 38855116872.0
glycerophosphoryl diester phosphodiesteraseSAMN05443669_100134Not AvailablePositive39154 - 3987327182.1
rna polymerase sigma-70 factor, ecf subfamilySAMN05443669_100135Not AvailableNegative39979 - 4053021618.8
glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthaseSAMN05443669_100136Not AvailableNegative40521 - 4162742695.3
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive42025 - 4213418.01
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive42279 - 4237218.01

Displaying genes 31 – 40 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.