Flavobacterium xanthum strain DSM 3661

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium xanthum strain DSM 3661 is characterized as a rod-shaped bacterium, which is a common morphology among members of the Flavobacterium genus. This strain possesses a single flagellum, indicating its capability for motility, which can be crucial for its ecological interactions and survival in various environments. The strain is notable for having one replicon, which suggests a relatively straightforward genetic organization. The genome of Flavobacterium xanthum strain DSM 3661 is cataloged under the accession number FRBU00000000.1, providing a reference point for genetic and comparative studies within the Flavobacterium genus. Ecologically, members of the Flavobacterium genus are often associated with aquatic environments, where they play important roles in the degradation of organic matter. The motility conferred by the presence of a flagellum may enhance the strain's ability to navigate through its environment, facilitating access to nutrient sources. Understanding the traits of Flavobacterium xanthum strain DSM 3661 can provide insights into its ecological role and potential applications in bioremediation or biotechnology, particularly in the context of organic matter decomposition in aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium xanthum
Strainstrain DSM 3661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium xanthum strain DSM 3661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium xanthum strain DSM 3661 genome assembly, contig:

Gene Summary

Adenine Count

1232718 bp

Thymine Count

1230183 bp

Guanine Count

645366 bp

Cytosine Count

647315 bp

Genome Length

3755582 bp

Protein-coding Genes

3279 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase family m23SAMN05443669_1002139Not AvailablePositive396743 - 39742025556.1
hypothetical proteinSAMN05443669_1002140Not AvailablePositive397424 - 39790017873.0
arac-type dna-binding proteinSAMN05443669_1002141Not AvailablePositive398772 - 39930520512.0
pas domain s-box-containing proteinSAMN05443669_1002142Not AvailablePositive399306 - 402563122290.0
response regulator receiver domain-containing proteinSAMN05443669_1002143Not AvailablePositive402560 - 40289512591.1
helix-turn-helix domain-containing proteinSAMN05443669_1002144Not AvailablePositive403041 - 40368724939.3
capsular exopolysaccharide familySAMN05443669_10031Not AvailableNegative404280 - 40664088086.0
polysaccharide export outer membrane proteinSAMN05443669_10032Not AvailableNegative406650 - 40744729352.9
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN05443669_10033Not AvailableNegative407739 - 40970674083.5
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN05443669_10034Not AvailableNegative410500 - 41168143103.8

Displaying genes 371 – 380 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.