Flavobacterium sp. CF108

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF108 is a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This organism has a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of Flavobacterium sp. CF108 is cataloged under the accession number FQWW00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As a member of the Flavobacteriaceae family, Flavobacterium species are typically found in aquatic environments, where they play significant roles in the degradation of organic matter. This ecological function is essential for nutrient cycling, particularly in freshwater and marine ecosystems. The motility provided by flagella may enhance its ability to navigate through varying substrates in these environments, allowing it to efficiently locate and utilize organic materials for growth. In summary, Flavobacterium sp. CF108's rod shape, presence of flagella, and single replicon highlight its potential adaptability and ecological significance. The organism's role in organic matter degradation underscores the importance of Flavobacterium species in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF108
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF108 genome assembly, contig: Ga0115465_119,

Gene Summary

Adenine Count

1846761 bp

Thymine Count

1880990 bp

Guanine Count

928010 bp

Cytosine Count

955086 bp

Genome Length

5610899 bp

Protein-coding Genes

4615 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein, cobalt-zinc-cadmium efflux systemSAMN05444671_0760Not AvailableNegative403618 - 40487147427.5
signal transduction histidine kinaseSAMN05444671_0761Not AvailableNegative404974 - 40634151978.4
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN05444671_0762Not AvailableNegative406331 - 40701726327.0
hypothetical proteinSAMN05444671_0763Not AvailableNegative407139 - 40766019943.3
lyttr dna-binding domain-containing proteinSAMN05444671_0764Not AvailableNegative407929 - 40905343034.2
haem-binding domain-containing proteinSAMN05444671_0765Not AvailablePositive409244 - 41022436988.0
hypothetical proteinSAMN05444671_0766Not AvailablePositive410227 - 41069717129.6
transcriptional regulator, hxlr familySAMN05444671_0767Not AvailableNegative410706 - 41108614706.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05444671_0768Not AvailablePositive411210 - 41200428304.2
hypothetical proteinSAMN05444671_0769Not AvailableNegative412145 - 4122915704.29

Displaying genes 371 – 380 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.