Flavobacterium sp. CF108

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF108 is a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This organism has a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of Flavobacterium sp. CF108 is cataloged under the accession number FQWW00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As a member of the Flavobacteriaceae family, Flavobacterium species are typically found in aquatic environments, where they play significant roles in the degradation of organic matter. This ecological function is essential for nutrient cycling, particularly in freshwater and marine ecosystems. The motility provided by flagella may enhance its ability to navigate through varying substrates in these environments, allowing it to efficiently locate and utilize organic materials for growth. In summary, Flavobacterium sp. CF108's rod shape, presence of flagella, and single replicon highlight its potential adaptability and ecological significance. The organism's role in organic matter degradation underscores the importance of Flavobacterium species in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF108
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF108 genome assembly, contig: Ga0115465_119,

Gene Summary

Adenine Count

1846761 bp

Thymine Count

1880990 bp

Guanine Count

928010 bp

Cytosine Count

955086 bp

Genome Length

5610899 bp

Protein-coding Genes

4615 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase inso and inactivated derivativesSAMN05444671_3954Not AvailableNegative4074729 - 407589545579.5
Trna-serNot AvailableNot AvailablePositive4076194 - 4076281Not Available
acyl-coa hydrolaseSAMN05444671_3956Not AvailableNegative4076422 - 407682014701.8
3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase iiSAMN05444671_3957Not AvailableNegative4076826 - 407795641761.3
lipopolysaccharide export system permease proteinSAMN05444671_3958Not AvailableNegative4077959 - 407941654649.2
outer membrane lipoprotein-sorting proteinSAMN05444671_3959Not AvailableNegative4079425 - 408011726318.8
dna segregation atpase ftsk/spoiiie, s-dna-t familySAMN05444671_3960Not AvailableNegative4080125 - 408258191011.2
diacylglycerol kinase (atp)SAMN05444671_3961Not AvailableNegative4082595 - 408296913755.1
thiol peroxidase (atypical 2-cys peroxiredoxin)SAMN05444671_3962Not AvailableNegative4082983 - 408348017191.4
hypothetical proteinSAMN05444671_3963Not AvailableNegative4083851 - 40841089670.78

Displaying genes 3511 – 3520 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.