Flavobacterium sp. CF108

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF108 is a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This organism has a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of Flavobacterium sp. CF108 is cataloged under the accession number FQWW00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As a member of the Flavobacteriaceae family, Flavobacterium species are typically found in aquatic environments, where they play significant roles in the degradation of organic matter. This ecological function is essential for nutrient cycling, particularly in freshwater and marine ecosystems. The motility provided by flagella may enhance its ability to navigate through varying substrates in these environments, allowing it to efficiently locate and utilize organic materials for growth. In summary, Flavobacterium sp. CF108's rod shape, presence of flagella, and single replicon highlight its potential adaptability and ecological significance. The organism's role in organic matter degradation underscores the importance of Flavobacterium species in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF108
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF108 genome assembly, contig: Ga0115465_119,

Gene Summary

Adenine Count

1846761 bp

Thymine Count

1880990 bp

Guanine Count

928010 bp

Cytosine Count

955086 bp

Genome Length

5610899 bp

Protein-coding Genes

4615 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444671_2446Not AvailableNegative2273253 - 227366615755.8
rna polymerase sigma-70 factor, ecf subfamilySAMN05444671_2447Not AvailableNegative2273700 - 227424221050.3
polyketide cyclase / dehydrase and lipid transportSAMN05444671_2448Not AvailableNegative2274318 - 227553544667.4
phosphoribosyl-atp pyrophosphohydrolaseSAMN05444671_2449Not AvailablePositive2275878 - 227625814400.3
branched-chain amino acid aminotransferaseSAMN05444671_2450Not AvailableNegative2276318 - 227738839706.2
trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmcSAMN05444671_2451Not AvailablePositive2277700 - 227836525541.5
hypothetical proteinSAMN05444671_2452Not AvailablePositive2278532 - 22787297852.9
lysr family transcriptional regulator, hydrogen peroxide-inducible genes activatorSAMN05444671_2453Not AvailableNegative2278759 - 227970635770.9
starvation-inducible dna-binding proteinSAMN05444671_2454Not AvailablePositive2279817 - 228029618423.2
hypothetical proteinSAMN05444671_2455Not AvailablePositive2280430 - 228070810266.8

Displaying genes 2031 – 2040 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.