Flavobacterium sp. CF108

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF108 is a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This organism has a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of Flavobacterium sp. CF108 is cataloged under the accession number FQWW00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As a member of the Flavobacteriaceae family, Flavobacterium species are typically found in aquatic environments, where they play significant roles in the degradation of organic matter. This ecological function is essential for nutrient cycling, particularly in freshwater and marine ecosystems. The motility provided by flagella may enhance its ability to navigate through varying substrates in these environments, allowing it to efficiently locate and utilize organic materials for growth. In summary, Flavobacterium sp. CF108's rod shape, presence of flagella, and single replicon highlight its potential adaptability and ecological significance. The organism's role in organic matter degradation underscores the importance of Flavobacterium species in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF108
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF108 genome assembly, contig: Ga0115465_119,

Gene Summary

Adenine Count

1846761 bp

Thymine Count

1880990 bp

Guanine Count

928010 bp

Cytosine Count

955086 bp

Genome Length

5610899 bp

Protein-coding Genes

4615 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator receiver domain-containing proteinSAMN05444671_2393Not AvailableNegative2214249 - 221469816885.1
hyaluronan synthaseSAMN05444671_2394Not AvailablePositive2215242 - 221667854401.5
hypothetical proteinSAMN05444671_2395Not AvailableNegative2216731 - 221712014747.7
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN05444671_2396Not AvailableNegative2217125 - 221795531119.7
arac-type dna-binding proteinSAMN05444671_2397Not AvailableNegative2218028 - 221893634739.8
adp-ribose pyrophosphatase yjhb, nudix familySAMN05444671_2398Not AvailablePositive2219031 - 221945916521.0
transcriptional regulator, tetr familySAMN05444671_2399Not AvailablePositive2219601 - 222018221740.5
predicted arabinose efflux permease, mfs familySAMN05444671_2400Not AvailablePositive2220248 - 222143843261.3
transcriptional regulator, tetr familySAMN05444671_2401Not AvailablePositive2221562 - 222221224353.9
outer membrane protein tolcSAMN05444671_2402Not AvailablePositive2222278 - 222354348376.1

Displaying genes 1981 – 1990 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.