Flavobacterium sp. CF108

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF108 is a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This organism has a single replicon, which suggests a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of Flavobacterium sp. CF108 is cataloged under the accession number FQWW00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As a member of the Flavobacteriaceae family, Flavobacterium species are typically found in aquatic environments, where they play significant roles in the degradation of organic matter. This ecological function is essential for nutrient cycling, particularly in freshwater and marine ecosystems. The motility provided by flagella may enhance its ability to navigate through varying substrates in these environments, allowing it to efficiently locate and utilize organic materials for growth. In summary, Flavobacterium sp. CF108's rod shape, presence of flagella, and single replicon highlight its potential adaptability and ecological significance. The organism's role in organic matter degradation underscores the importance of Flavobacterium species in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF108
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF108 genome assembly, contig: Ga0115465_119,

Gene Summary

Adenine Count

1846761 bp

Thymine Count

1880990 bp

Guanine Count

928010 bp

Cytosine Count

955086 bp

Genome Length

5610899 bp

Protein-coding Genes

4615 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arabinan endo-1,5-alpha-l-arabinosidaseSAMN05444671_2007Not AvailableNegative1818689 - 182030860151.6
alpha-n-arabinofuranosidaseSAMN05444671_2008Not AvailableNegative1820321 - 182186557012.1
arabinan endo-1,5-alpha-l-arabinosidaseSAMN05444671_2009Not AvailableNegative1821926 - 182293635672.5
starch-binding associating with outer membraneSAMN05444671_2010Not AvailableNegative1823118 - 182467758540.1
tonb-linked outer membrane protein, susc/raga familySAMN05444671_2011Not AvailableNegative1824707 - 1827763112360.0
adp-ribose pyrophosphatase yjhb, nudix familySAMN05444671_2012Not AvailablePositive1828324 - 182901326827.2
transcriptional regulator, gntr familySAMN05444671_2013Not AvailableNegative1829425 - 183051041539.9
aldose 1-epimeraseSAMN05444671_2014Not AvailablePositive1830527 - 183158239019.3
galactokinaseSAMN05444671_2015Not AvailablePositive1831600 - 183276043239.7
utp-hexose-1-phosphate uridylyltransferase /udp-glucose-hexose-1-phosphate uridylyltransferaseSAMN05444671_2016Not AvailablePositive1832777 - 183383840985.5

Displaying genes 1601 – 1610 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.