Fibrobacter sp. UWCM

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWCM is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genetic information for Fibrobacter sp. UWCM is cataloged under the accession number FQWR00000000.1, allowing for further exploration and study through genomic databases. As a member of the Fibrobacter genus, this bacterium is likely involved in the degradation of plant material, particularly cellulose, due to the general ecological role of other Fibrobacter species in fiber degradation within anaerobic environments. This capability can significantly influence nutrient cycling in ecosystems, especially in those rich in plant biomass. Understanding the characteristics and functions of Fibrobacter sp. UWCM provides insights into its potential applications in biotechnology, particularly in the fields of waste management and bioenergy production, where efficient breakdown of organic materials is crucial.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWCM
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWCM
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWCM genome assembly, contig: Ga0136281_165, whole

Gene Summary

Adenine Count

880732 bp

Thymine Count

881192 bp

Guanine Count

1018104 bp

Cytosine Count

1004139 bp

Genome Length

3784167 bp

Protein-coding Genes

3103 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05720761_12125Not AvailablePositive2981731 - 298260032809.4
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN05720761_12126Not AvailableNegative2982636 - 298327422374.3
aaa+-type atpase, spovk/ycf46/vps4 familySAMN05720761_12127Not AvailablePositive2983434 - 298582189779.4
protein of unknown function duf58SAMN05720761_12128Not AvailableNegative2986409 - 298729933591.7
hsp20 family proteinSAMN05720761_12129Not AvailableNegative2987725 - 298810514197.9
por secretion system c-terminal sorting domain-containing proteinSAMN05720761_12130Not AvailableNegative2988485 - 299001755991.1
outer membrane proteinSAMN05720761_12131Not AvailableNegative2990189 - 299148146536.8
Trna-valNot AvailableNot AvailablePositive2991574 - 2991648Not Available
site-specific recombinase xerdSAMN05720761_12133Not AvailablePositive2991767 - 299280139569.7
antirestriction protein ardcSAMN05720761_12134Not AvailableNegative2993732 - 299459232419.7

Displaying genes 2471 – 2480 of 3169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.