Flavobacterium defluvii strain DSM 17963

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium defluvii strain DSM 17963 is a Gram-negative, rod-shaped bacterium characterized by its motility, facilitated by the presence of flagella. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions suitable for life in various environments. Flavobacterium defluvii DSM 17963 has a single replicon, reflecting a streamlined genomic organization typical of many bacteria within the Flavobacterium genus. Notably, this strain is non-spore-forming, which suggests that it relies on other survival strategies under adverse conditions rather than forming spores. Understanding the biological and ecological roles of Flavobacterium defluvii can provide insights into its function in the environment. The bacterium's ability to thrive at moderate temperatures and its motility may enable it to inhabit diverse ecological niches, potentially playing a significant role in the decomposition of organic matter in aquatic environments. Additionally, the presence of this bacterium in natural settings could contribute to nutrient cycling and the overall health of microbial communities. The accession number for Flavobacterium defluvii strain DSM 17963 is FQWC00000000.1, which can be referenced for genomic information and further studies related to its characteristics and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium defluvii
Strainstrain DSM 17963

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium defluvii strain DSM 17963
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium defluvii strain DSM 17963 genome assembly, contig:

Gene Summary

Adenine Count

1625039 bp

Thymine Count

1602877 bp

Guanine Count

825711 bp

Cytosine Count

817191 bp

Genome Length

4871623 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chain length determinant proteinSAMN05443663_101666Not AvailableNegative748891 - 74977233446.8
hydrophobic/amphiphilic exporter-1, hae1 familySAMN05443663_101667Not AvailableNegative749999 - 753175115514.0
rnd family efflux transporter, mfp subunitSAMN05443663_101668Not AvailableNegative753268 - 75433538139.0
outer membrane protein tolcSAMN05443663_101669Not AvailableNegative754345 - 75567949957.8
transcriptional regulator, tetr familySAMN05443663_101670Not AvailableNegative755711 - 75631023502.3
polyisoprenoid-binding protein yceiSAMN05443663_101671Not AvailableNegative756420 - 75694119534.9
geranylgeranyl diphosphate synthase, type iiSAMN05443663_101672Not AvailablePositive757166 - 75818238825.6
alpha,alpha-trehalaseSAMN05443663_101673Not AvailableNegative758330 - 76019872357.9
fucose permeaseSAMN05443663_101674Not AvailableNegative760188 - 76140845080.9
outer membrane receptor proteins, mostly fe transportSAMN05443663_101675Not AvailableNegative761729 - 76436897930.6

Displaying genes 661 – 670 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.