Flavobacterium defluvii strain DSM 17963

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium defluvii strain DSM 17963 is a Gram-negative, rod-shaped bacterium characterized by its motility, facilitated by the presence of flagella. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions suitable for life in various environments. Flavobacterium defluvii DSM 17963 has a single replicon, reflecting a streamlined genomic organization typical of many bacteria within the Flavobacterium genus. Notably, this strain is non-spore-forming, which suggests that it relies on other survival strategies under adverse conditions rather than forming spores. Understanding the biological and ecological roles of Flavobacterium defluvii can provide insights into its function in the environment. The bacterium's ability to thrive at moderate temperatures and its motility may enable it to inhabit diverse ecological niches, potentially playing a significant role in the decomposition of organic matter in aquatic environments. Additionally, the presence of this bacterium in natural settings could contribute to nutrient cycling and the overall health of microbial communities. The accession number for Flavobacterium defluvii strain DSM 17963 is FQWC00000000.1, which can be referenced for genomic information and further studies related to its characteristics and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium defluvii
Strainstrain DSM 17963

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium defluvii strain DSM 17963
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium defluvii strain DSM 17963 genome assembly, contig:

Gene Summary

Adenine Count

1625039 bp

Thymine Count

1602877 bp

Guanine Count

825711 bp

Cytosine Count

817191 bp

Genome Length

4871623 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-citramalate synthaseSAMN05443663_101626Not AvailablePositive708513 - 71000955453.4
3-isopropylmalate dehydrogenaseSAMN05443663_101627Not AvailablePositive710164 - 71122538514.2
rna recognition motif. (a.k.a. rrm, rbd, or rnp domain)SAMN05443663_101628Not AvailableNegative711350 - 71169412553.5
hypothetical proteinSAMN05443663_101629Not AvailableNegative711820 - 71230517882.0
ssu ribosomal protein s16pSAMN05443663_101630Not AvailablePositive712495 - 71306120088.4
16s rrna processing protein rimmSAMN05443663_101631Not AvailablePositive713079 - 71360320079.3
trna1val (adenine37-n6)-methyltransferaseSAMN05443663_101632Not AvailablePositive713685 - 71439227031.8
multidrug resistance efflux pumpSAMN05443663_101633Not AvailableNegative714389 - 71568448981.2
atp-binding cassette, subfamily bSAMN05443663_101634Not AvailableNegative715687 - 71787982909.1
hypothetical proteinSAMN05443663_101635Not AvailableNegative718320 - 7184785733.83

Displaying genes 621 – 630 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.