Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter caeni |
| Strain | strain DSM 16990 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2294423 bp
Thymine Count
2291506 bp
Guanine Count
1650302 bp
Cytosine Count
1590094 bp
Genome Length
7828785 bp
Protein-coding Genes
6685 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN04488522_1016 | Not Available | Negative | 6333 - 6968 | 24575.0 |
| dinb superfamily protein | SAMN04488522_1017 | Not Available | Negative | 6974 - 7444 | 17770.4 |
| hypothetical protein | SAMN04488522_1018 | Not Available | Negative | 7588 - 8424 | 31716.2 |
| malate dehydrogenase (quinone) | SAMN04488522_1019 | Not Available | Positive | 9013 - 10518 | 55421.8 |
| hypothetical protein | SAMN04488522_10110 | Not Available | Positive | 10766 - 11353 | 22600.0 |
| hypothetical protein | SAMN04488522_10111 | Not Available | Positive | 11402 - 11908 | 20378.1 |
| hypothetical protein | SAMN04488522_10112 | Not Available | Positive | 11986 - 12108 | 4440.53 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04488522_10113 | Not Available | Positive | 12183 - 13229 | 38003.4 |
| hypothetical protein | SAMN04488522_10114 | Not Available | Positive | 13251 - 14288 | 39785.6 |
| hypothetical protein | SAMN04488522_10115 | Not Available | Negative | 14283 - 15860 | 59367.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
