Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_102199 | Not Available | Positive | 1111544 - 1111906 | 13801.7 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05444682_102200 | Not Available | Positive | 1112024 - 1114327 | 84476.4 |
| thioredoxin-related protein | SAMN05444682_102201 | Not Available | Positive | 1114342 - 1114830 | 18357.2 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05444682_102202 | Not Available | Positive | 1114916 - 1115494 | 20651.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05444682_102203 | Not Available | Positive | 1115586 - 1116233 | 24145.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05444682_102204 | Not Available | Positive | 1116249 - 1117175 | 34468.2 |
| hypothetical protein | SAMN05444682_102205 | Not Available | Negative | 1117232 - 1118266 | 40060.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_102206 | Not Available | Positive | 1118325 - 1119053 | 27471.6 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05444682_102207 | Not Available | Positive | 1119079 - 1120725 | 60217.6 |
| hypothetical protein | SAMN05444682_102208 | Not Available | Negative | 1121031 - 1121231 | 7213.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
