Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102189 | Not Available | Positive | 1098360 - 1101968 | 134978.0 |
| starch-binding associating with outer membrane | SAMN05444682_102190 | Not Available | Positive | 1101990 - 1103741 | 66273.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444682_102191 | Not Available | Positive | 1103837 - 1104853 | 37325.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05444682_102192 | Not Available | Negative | 1104864 - 1105343 | 17390.1 |
| gliding motility-associated lipoprotein gldj | SAMN05444682_102193 | Not Available | Positive | 1105535 - 1107100 | 59356.4 |
| protein of unknown function | SAMN05444682_102194 | Not Available | Negative | 1107241 - 1108719 | 54144.6 |
| starch synthase | SAMN05444682_102195 | Not Available | Negative | 1108745 - 1109575 | 31611.5 |
| pantoate--beta-alanine ligase | SAMN05444682_102196 | Not Available | Positive | 1109728 - 1110570 | 31587.3 |
| hypothetical protein | SAMN05444682_102197 | Not Available | Negative | 1110576 - 1110728 | 5509.62 |
| l-aspartate 1-decarboxylase | SAMN05444682_102198 | Not Available | Positive | 1111088 - 1111435 | 12780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
