Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ccma, bactofilin family | SAMN05444682_102179 | Not Available | Positive | 1090833 - 1091264 | 15190.2 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN05444682_102180 | Not Available | Positive | 1091236 - 1091460 | 8418.48 |
| hypothetical protein | SAMN05444682_102181 | Not Available | Negative | 1091464 - 1092426 | 35659.6 |
| ycei-like domain-containing protein | SAMN05444682_102182 | Not Available | Negative | 1092438 - 1092980 | 20450.7 |
| hypothetical protein | SAMN05444682_102183 | Not Available | Negative | 1092977 - 1093339 | 13052.8 |
| secreted repeat of unknown function | SAMN05444682_102184 | Not Available | Negative | 1093373 - 1094227 | 30818.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102185 | Not Available | Positive | 1094380 - 1094958 | 22211.0 |
| hypothetical protein | SAMN05444682_102186 | Not Available | Positive | 1094961 - 1096175 | 44194.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102187 | Not Available | Positive | 1096381 - 1096968 | 22218.0 |
| fecr family protein | SAMN05444682_102188 | Not Available | Positive | 1097048 - 1098205 | 43336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
