Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly suf system protein | SAMN05444682_102159 | Not Available | Negative | 1054798 - 1055118 | 11451.1 |
| nad(p)h-hydrate epimerase | SAMN05444682_102160 | Not Available | Positive | 1055378 - 1056871 | 54165.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102161 | Not Available | Positive | 1057094 - 1057681 | 22797.8 |
| fecr family protein | SAMN05444682_102162 | Not Available | Positive | 1057795 - 1058970 | 43663.7 |
| iron complex outermembrane recepter protein | SAMN05444682_102163 | Not Available | Positive | 1059164 - 1062487 | 120573.0 |
| susd family protein | SAMN05444682_102164 | Not Available | Positive | 1062499 - 1064049 | 58027.9 |
| predicted dehydrogenase | SAMN05444682_102165 | Not Available | Negative | 1064115 - 1065545 | 52720.2 |
| protein of unknown function | SAMN05444682_102166 | Not Available | Positive | 1065726 - 1066085 | 13074.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444682_102167 | Not Available | Positive | 1066229 - 1066825 | 23397.5 |
| fecr family protein | SAMN05444682_102168 | Not Available | Positive | 1066940 - 1068028 | 41035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
