Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system atp-binding protein | SAMN05444682_102149 | Not Available | Negative | 1045116 - 1045850 | 27701.7 |
| exonuclease recj | SAMN05444682_102150 | Not Available | Negative | 1045927 - 1047627 | 63227.1 |
| metallo-beta-lactamase superfamily protein | SAMN05444682_102151 | Not Available | Positive | 1047663 - 1048442 | 29106.8 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444682_102152 | Not Available | Positive | 1048526 - 1048996 | 17087.4 |
| uncharacterized conserved protein | SAMN05444682_102153 | Not Available | Positive | 1049009 - 1049359 | 12556.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102154 | Not Available | Positive | 1049359 - 1050609 | 47448.4 |
| carbon starvation protein | SAMN05444682_102155 | Not Available | Positive | 1050819 - 1052657 | 66006.8 |
| hypothetical protein | SAMN05444682_102156 | Not Available | Negative | 1052674 - 1052850 | 6190.71 |
| potassium/proton antiporter regulatory subunit, cpa2 family | SAMN05444682_102157 | Not Available | Positive | 1053044 - 1053520 | 17312.7 |
| potassium/proton antiporter membrane subunit, cpa2 family | SAMN05444682_102158 | Not Available | Positive | 1053545 - 1054786 | 44966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
