Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_102139 | Not Available | Negative | 1027246 - 1028961 | 64993.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102140 | Not Available | Negative | 1028983 - 1032564 | 132894.0 |
| fecr family protein | SAMN05444682_102141 | Not Available | Negative | 1032689 - 1033903 | 45009.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102142 | Not Available | Negative | 1033967 - 1034578 | 23446.3 |
| arylsulfatase a | SAMN05444682_102143 | Not Available | Negative | 1034700 - 1036133 | 53210.7 |
| starch-binding associating with outer membrane | SAMN05444682_102144 | Not Available | Negative | 1036173 - 1037954 | 68070.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102145 | Not Available | Negative | 1037991 - 1041482 | 128378.0 |
| fecr family protein | SAMN05444682_102146 | Not Available | Negative | 1041655 - 1042677 | 38433.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102147 | Not Available | Negative | 1042840 - 1043430 | 22573.6 |
| gh3 auxin-responsive promoter | SAMN05444682_102148 | Not Available | Negative | 1043518 - 1045029 | 58031.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
