Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_102129 | Not Available | Negative | 1014371 - 1014691 | 12536.8 |
| nadph:quinone reductase | SAMN05444682_102130 | Not Available | Negative | 1014705 - 1015601 | 32973.3 |
| Trna-asn | Not Available | Not Available | Positive | 1015732 - 1015805 | Not Available |
| bnr/asp-box repeat-containing protein | SAMN05444682_102132 | Not Available | Negative | 1015932 - 1017020 | 39736.2 |
| hypothetical protein | SAMN05444682_102133 | Not Available | Negative | 1017017 - 1017661 | 23982.6 |
| magnesium transporter | SAMN05444682_102134 | Not Available | Negative | 1017658 - 1019034 | 50867.1 |
| hypothetical protein | SAMN05444682_102135 | Not Available | Positive | 1019665 - 1022499 | 108732.0 |
| arylsulfatase a | SAMN05444682_102136 | Not Available | Negative | 1022493 - 1024064 | 61167.3 |
| arylsulfatase a | SAMN05444682_102137 | Not Available | Negative | 1024061 - 1025521 | 54554.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_102138 | Not Available | Negative | 1025545 - 1027224 | 62176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
