Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102119 | Not Available | Positive | 1003708 - 1004223 | 20020.8 |
| predicted heme/steroid binding protein | SAMN05444682_102120 | Not Available | Positive | 1004210 - 1004476 | 10233.1 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444682_102121 | Not Available | Negative | 1004484 - 1005446 | 35159.4 |
| hypothetical protein | SAMN05444682_102122 | Not Available | Positive | 1005491 - 1005859 | 14060.4 |
| iron complex outermembrane recepter protein | SAMN05444682_102123 | Not Available | Positive | 1005966 - 1008272 | 85136.2 |
| hypothetical protein | SAMN05444682_102124 | Not Available | Positive | 1008283 - 1009605 | 47643.4 |
| wd40-like beta propeller repeat | SAMN05444682_102125 | Not Available | Positive | 1009709 - 1010656 | 34902.3 |
| wd40-like beta propeller repeat | SAMN05444682_102126 | Not Available | Positive | 1010681 - 1011679 | 37348.9 |
| signal transduction histidine kinase | SAMN05444682_102127 | Not Available | Positive | 1011721 - 1013742 | 76768.1 |
| two component transcriptional regulator, luxr family | SAMN05444682_102128 | Not Available | Positive | 1013743 - 1014369 | 23013.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
