Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase, type 1 | SAMN05444682_102109 | Not Available | Negative | 992952 - 995528 | 99053.6 |
| hypothetical protein | SAMN05444682_102110 | Not Available | Negative | 995846 - 996652 | 29970.8 |
| hypothetical protein | SAMN05444682_102111 | Not Available | Positive | 996653 - 996769 | 4449.3 |
| hypothetical protein | SAMN05444682_102112 | Not Available | Positive | 996783 - 996905 | 4709.78 |
| hypothetical protein | SAMN05444682_102113 | Not Available | Negative | 997011 - 997694 | 25620.2 |
| hypothetical protein | SAMN05444682_102114 | Not Available | Negative | 997751 - 998434 | 25259.3 |
| tigr01666 family membrane protein | SAMN05444682_102115 | Not Available | Positive | 998557 - 1000719 | 82460.6 |
| thioredoxin reductase (nadph) | SAMN05444682_102116 | Not Available | Positive | 1000760 - 1001749 | 36582.8 |
| transcriptional regulator, tetr family | SAMN05444682_102117 | Not Available | Negative | 1001746 - 1002360 | 23207.5 |
| udp-n-acetylmuramate dehydrogenase | SAMN05444682_102118 | Not Available | Positive | 1002474 - 1003502 | 38296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
