Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10177 | Not Available | Negative | 89895 - 90083 | 7093.48 |
| protein of unknown function | SAMN05444682_10178 | Not Available | Negative | 90265 - 91365 | 41732.7 |
| crispr-associated protein (cas_cas02710) | SAMN05444682_10179 | Not Available | Negative | 91362 - 91940 | 22019.4 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN05444682_10180 | Not Available | Negative | 91937 - 93385 | 55083.0 |
| hypothetical protein | SAMN05444682_10181 | Not Available | Negative | 93385 - 94758 | 53840.6 |
| dna helicase, putative | SAMN05444682_10182 | Not Available | Negative | 94759 - 98622 | 147899.0 |
| hypothetical protein | SAMN05444682_10183 | Not Available | Negative | 100085 - 100651 | 21317.8 |
| protein of unknown function | SAMN05444682_10184 | Not Available | Positive | 101181 - 103568 | 90293.6 |
| ahpc/tsa family protein | SAMN05444682_10185 | Not Available | Positive | 103575 - 104141 | 21649.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10186 | Not Available | Positive | 104162 - 107353 | 118633.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
