Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein, cspa family | SAMN05444682_10299 | Not Available | Positive | 984260 - 984709 | 16943.4 |
| acyl-coa dehydrogenase | SAMN05444682_102100 | Not Available | Positive | 984812 - 986329 | 56469.4 |
| ferritin-like metal-binding protein ycie | SAMN05444682_102101 | Not Available | Positive | 986449 - 986973 | 19259.0 |
| competence/damage-inducible protein cina | SAMN05444682_102102 | Not Available | Positive | 986992 - 987540 | 19857.0 |
| hypothetical protein | SAMN05444682_102103 | Not Available | Negative | 987549 - 987839 | 10897.8 |
| Trna-leu | Not Available | Not Available | Positive | 987939 - 988024 | Not Available |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05444682_102105 | Not Available | Negative | 988202 - 989095 | 33214.1 |
| polyphosphate kinase | SAMN05444682_102106 | Not Available | Negative | 989102 - 991204 | 81758.6 |
| predicted dehydrogenase | SAMN05444682_102107 | Not Available | Negative | 991274 - 992308 | 39480.6 |
| hypothetical protein | SAMN05444682_102108 | Not Available | Negative | 992326 - 992856 | 19252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
