Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit gamma/tau | SAMN05444682_10289 | Not Available | Negative | 976455 - 978293 | 67667.0 |
| hypothetical protein | SAMN05444682_10290 | Not Available | Negative | 978323 - 978736 | 15649.4 |
| transcriptional regulator, spx/mgsr family | SAMN05444682_10291 | Not Available | Positive | 978878 - 979222 | 13153.7 |
| hypothetical protein | SAMN05444682_10292 | Not Available | Positive | 979246 - 981213 | 74300.6 |
| hypothetical protein | SAMN05444682_10293 | Not Available | Positive | 981210 - 982034 | 31146.3 |
| hypothetical protein | SAMN05444682_10294 | Not Available | Negative | 982031 - 982252 | 7931.39 |
| hypothetical protein | SAMN05444682_10295 | Not Available | Negative | 982264 - 982401 | 5440.72 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10296 | Not Available | Negative | 982355 - 983008 | 25395.4 |
| hypothetical protein | SAMN05444682_10297 | Not Available | Negative | 983022 - 983402 | 13768.3 |
| hypothetical protein | SAMN05444682_10298 | Not Available | Positive | 983772 - 983942 | 6157.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
